More updates to the process...
The head is complete with the exception of 1 valve, because IE sent a retainer that was only partially machined and def can't be used. The QA department must have had the day off.
.007" was milled off the head to get it flat and true. The valves were seated .010" deeper into the head (seats had to be recut) and the stems were machined to keep OEM geometry. Piston to valve clearance is therefore increased .003".
The machinist measured the bores and found a .004" taper on cyl 1 (think of an ice cream cone), and noted that they are egged out in addition to being tapered. .004" is a huge amount of wear in engine terms. IDK what the stock piston to wall clearance is, but it is likely less than that, so clearances have more than doubled on the #1 cylinder. The others weren't as bad, but did show the same issues (oval shaped and tapering outward at the top). The oval shape comes from the load on the piston during the power stroke, which is uneven (the rod doesn't go straight down) and wears the bore unevenly over time. This is accelerated by high boost pressures, and my right foot spending too much time on the floor.
What is very odd about this to me is that the crosshatch looked normal...but i guess that's why visuals don't mean a whole lot at engine tolerances.
My usage was definitely very severe and high heat, but i didn't expect the block to be significantly worn. He expects it to need about .3mm to get it back to a straight cylinder, so 83mm it is.
The machinist is very thorough but this process is taking about 2x as long as the timeline we initially established so i plan to switch from JE pistons to IE because of the lead time (4-6 weeks vs off the shelf).
Time to order the bottom end